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Microbial Diversity Analysis Using 16S rRNA Gene Amplicon Sequencing of Rhizosphere Soils from Double-Cropping Rice and Rice-Shrimp Farming Systems in Soc Trang, Vietnam

Do Biotechnology Research and Development Institute, Can Tho University, Can Tho, Viet Nam|
Thuy-Duong (57191167605) | Van-Thanh (57680584900); Ho-Huynh | Sy-Nam (57200246888); Nguyen | Anh-Thy (57329032500); Tran | Minh-Dieu (57329798200); Chau-Thi | Anh-Thi (57329219300); Bui-Thi | Thuy-Vy (57210859622); Nguyen-Pham Department of Genetics, Faculty of Biology and Biotechnology, University of Science, VNU-HCM, Ho Chi Minh City, Viet Nam| Lan-Anh (57216963082); Nguyen College of Environment and Natural Resources, Can Tho University, Can Tho, Viet Nam| Van-Phuc (57216964969); Le Faculty of Agriculture, Can Tho University, Can Tho, Viet Nam| Thi-Xuan (57329219200); Huynh Ktest Science Company, Ho Chi Minh City, Viet Nam|

Microbiology Resource Announcements Số 44, năm 2021 (Tập 10, trang -)

ISSN: 2576098X

ISSN: 2576098X

DOI: 10.1128/MRA.00595-21

Tài liệu thuộc danh mục:

Article

English

Từ khóa: bacterial RNA; internal transcribed spacer; RNA 16S; Acidobacteriota; Actinobacteria; Actinobacteriota; Article; Chloroflexi; DNA extraction; Firmicutes; gene sequence; metagenomics; microbial diversity; Myxococcota; nonhuman; rhizosphere; rice; shrimp farming; soil; soil microflora; Viet Nam
Tóm tắt tiếng anh
Different rice farming systems affect the soil microbial communities. Here, we report the results of 16S rRNA gene amplicon sequencing of soils collected from intensive rice cultivation and rice-shrimp farming systems in Soc Trang, Vietnam. The dominant phyla in these systems were Firmicutes, Actinobacteriota, Chloroflexi, Myxococcota, and Acidobacteriota. Copyright � 2021 Do et al. This is an openaccess article distributed under the terms of the Creative Commons Attribution 4.0 International license.

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